Brent,
It looks like something is going on with your setup because if you are using a MagDrive 12, you should be pushing at least 800 gallons per hour at full throttle. That looks more like 200 gallons per hour. How far is the pump from the reactor and how far does the output have to travel before it exits into the sump or tank?
Also, have tried using a different media? Sometimes, the cheaper stuff out there does not work as well. You get what you pay for and cheaper media tends to clump up much more than the higher grade stuff.
Regards,
Carlos Chacon
CoralVue